CropMetaDiscover v1.0

CropMetaDiscover allows users to upload sample LC-MS datafiles in standard formats (mzML, mzXML, or mzData), and uses our pipeline to perform metabolite annotation on the samples. The pipeline consists of three steps: 1) detecting peaks in MS1 spectra and extracting MS2 spectra for the detected peaks; 2) annotating peaks by matching their MS1/MS2 patterns to those of reference metabolites in MS2T library of a designated crop; 3) reporting the sample metabolic profile by extracting peak intensity values and metabolite identity.

Note: tips for using CropMetaDiscover

Data upload portal

User Contact Info

    *First (given) name:    Middle name:     *Last (family) name:

Enter your institute:   

Enter your *email:    (An email is needed to receive link to results)

Raw Mass Spectral Data

(One LC-MS datafile can be uploaded at a time; a datafile is limited to 50M in size.) An example is found here:

Select a datafile to upload:   

Ionization mode:   
Crop species: